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                江瑞  副教授

                信息處理研究不屑所「

                通信地址:北京清華⊙大學自動化系  郵政編碼:100084
                聯系電話:010-62795578  Fax: 010-62786911
                Email:ruijiang@tsinghua.edu.cn

                展開
                教育背景

                1992年9月-1997年7月 清華大一下间两人竟然都有一种紧张學自動化系自動控制專業學習,獲工◆學學士學位

                1997年9月-2002年1月 清華大學自動化系檢測技術及自動对不起化裝置專卐業學習,獲工學博◥士學位

                工作履歷

                2007年-至今,清華大學自動化系,副教授

                2004年-2007年,美國南加州大學,博士後

                2002年-2003年,香港科○技大學,博士後

                研究領域

                生物信强势息學、系◤統生物學、模式識別、機器學習、統計推斷

                研究概況

                [1] 集成多種信息源識別導致常見疾病的遺傳變異 國家自然终于给自己打电话了科學基金 2009年1月至今

                [2] 基於生物網絡的全基因組關聯研究及其大規模並行實現 國家實驗室交叉那一刻學科基金 2008年11月至今

                [3] 現場可編程邏輯陣列及其在個人基因組計劃中的應用 國際合作項听得很是费劲目 2008年7月至今

                [4] 清華大學骨幹人才支持計劃 支持計劃 2007年8月至今

                獎勵與▓榮譽

                2008年,清華大學教↘學成果一等獎

                2008年,北京市教學成果一等獎

                2009年,國家級教學成果二等獎

                學術成果

                主要論著
                1. Yong Chen, Tao Jiang, Rui Jiang*, Uncover disease genes by maximizing information flow in the phenome-interactome network, Bioinformatics, 27:i167-i176, 2011

                2. Wangshu Zhang, Yong Chen, Fengzhu Sun, Rui Jiang*, DomainRBF: a Bayesian regression approach to the prioritization of candidate domains for complex diseases, BMC Systems Biology, 5:55, 2011

                3. Jianxing Feng, Rui Jiang*, Tao Jiang*, A max-flow based approach to the identification of protein complexes using protein interaction and microarray data, IEEE-ACM Transactions on Computational Biology and Bioinformatics, 8(3): 621-634, 2011

                4. Wangshu Zhang, Fengzhu Sun, Rui Jiang*, Integrating multiple protein-protein interaction networks to prioritize disease genes: A Bayesian regression approach, BMC Bioinformatics 12(Supp 1):S11, 2011

                5. Xiaolin Hao, Rui Jiang, Ting Chen*, Clustering 16S rRNA for OTU prediction: A method of unsupervised Bayesian clustering, Bioinformatics, 27: 611-618, 2011

                6. Suying Bao, Rui Jiang, WingKeung Kwan, BinBin Wang, Xu Ma, You-Qiang Song, Evaluation of next-generation sequencing software in mapping and assembly, Journal of Human Genetics, 56:406-414, 2011

                7. Rui Jiang*, Mingxin Gan, Peng He, Constructing a gene semantic similarity network for the prioritization of candidate genes, BMC Systems Biology, in press, 2011

                8. Jiaxin Wu, Mingxin Gan, Wangshu Zhang, Rui Jiang*, Extraction of sequence conservation features for the prioritization of candidate single amino acid polymorphisms, International Journal of Information Engineering and Electronic Business, 3(2):1-10, 2011

                9. Jiaxin Wu, Mngxin Gan, Wangshu Zhang, Rui Jiang*, Prediction of Disease-Associated Single Amino Acid Polymorphisms Based on Physiochemical Features, International Journal of Bioscience, Biochemistry and Bioinformatics, 1(2):102-108, 2011

                10. MAQC Consortium. The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models, Nature Biotechnology, 28:827-838 , 2010

                11. Wenhui Wang, Wangshu Zhang, Rui Jiang*, Yihui Luan*, Prioritisation of associations between protein domains and complex diseases using domain–domain interaction networks, IET Systems Biology, 4(3):212-222, 2010

                12. Wangshu Zhang, Yong Chen, Rui Jiang*, Comparative study of network-based prioritizations of human protein domains associated with complex diseases, Frontiers in Electronic Engineering in China, 5(2), 107-118, 2010

                13. Wanwan Tang, Xuebing Wu, Rui Jiang*, Yanda Li*, Epistatic module detection for case-control studies: Bayesian modules and Gibbs sampling strategies, PLoS Genetics, 5(5): e1000464, 2009

                14. Xuebing Wu, Qifang Liu, Rui Jiang*, Align human interactome with phenome to identify causative genes and networks underlying disease families, Bioinformatics, 25(1):98-104, 2009

                15. Rui Jiang*, Wanwan Tang, Xuebing Wu, Wenhui Fu, A random forest approach to the detection of epistatic interactions in case-control studies, BMC Bioinformatics, 10 (Suppl 1):S65, 2009

                16. Rui Jiang, Ting Chen, and Fengzhu Sun*. Bayesian models and Gibbs sampling strategies for local graph alignment and motif finding in stochastic networks, Communications in Information and Systems, 9(4):347-370, 2009

                17. Xuebing Wu, Rui Jiang, Michael Q. Zhang, Shao Li*, Network-based global inference of human disease genes, Molecular Systems Biology, 4:189, 2008

                18. Rui Jiang, Hua Yang, Linqi Zhou, C.-C. Jay Kuo, Fengzhu Sun, Ting Chen*, Sequence-based prioritization of nonsynonymous single-nucleotide polymorphisms for the Study of disease mutations, American Journal of Human Genetics, 81(2):346-360, 2007

                19. Rui Jiang, Zhidong Tu, Ting Chen*, Fengzhu Sun*, Network motif identification in stochastic networks, Proc Natl Acad Sci USA, 103(25): 9404-9409, 2006

                20. Rui Jiang, Hua Yang, Fengzhu Sun, Ting Chen*, Searching for interpretable rules for disease mutations: a simulated annealing strategy, BMC Bioinformatics, 7:417, 2006

                21. K. Y. Szeto, and Rui Jiang. A Quasi-Parallel realization of the investment frontier in computer resource allocation using simple genetic algorithm on a single computer. Lecture Notes in Computer Science, 2367:116~118, 2002

                22. Rui Jiang, Yupin Luo, Dongcheng Hu, and K. Y. Szeto. A multi-agent cooperating approach to quasi-parallel genetic algorithms. Acta Electronica Sinica. 30(10):1490-1495, 2002

                23. Rui Jiang, Yupin Luo, and Dongcheng Hu. Adaptive genetic algorithm based on population entropy estimating. Journal of Tsinghua University (Science and Technology). 42(3):358-361, 2002

                24. Rui Jiang, Yupin Luo, and Dongcheng Hu. Distributed parallel genetic algorithms based on multi- agent cooperating. Journal of Tsinghua University (Science and Technology). 42(9): 1209-1213, 2002

                25. Rui Jiang, Yupin Luo, Dongcheng Hu, and K. Y. Szeto. Coordinating exploration and exploitation to construct genetic algorithms. Tsinghua Science and Technology. 7(5):608-618, 2002

                26. Rui Jiang, Yupin Luo, Dongcheng Hu, and K. Y. Szeto. A genetic algorithm by coordinating exploration and exploitation: Convergence properties and performance analyses. Chinese Journal of Computers. 24(12):1233-1241, 2001

                27. Dongcheng Hu, Rui Jiang, and Yupin Luo. An adaptive classifier system tree for extending genetics-based machine learning in a dynamic environment. Artificial life and robotics. 4(1):7-11, 2000

                28. Jiaxin Wu, Wangshu Zhang, Rui Jiang*, Comparative Study of Ensemble Learning Approaches in the Identification of Disease Mutations, Proceedings of the 3rd International Conference on Biomedical Engineering and Informatics (BMEI 2010), Yantai, Shandong, China, 2306-2310, 2010

                29. Rui Jiang*, Feng Zeng, Wangshu Zhang, Xuebing Wu, and Zhihong Yu. Accelerating genome-wide association studies using CUDA compatible graphics cards, Proceedings of the 2009 joint conference on bioinformatics, systems biology and intelligent computing (IJCBS2009), Shanghai, August 3-5, 70-76, 2009

                30. Wangshu Zhang, Feng Zeng, Xuebing Wu, Xuegong Zhang, and Rui Jiang*. A comparative study of ensemble learning approaches in the classification of breast cancer metastasis, Proceedings of the 2009 joint conference on bioinformatics, systems biology and intelligent computing (IJCBS2009), Shanghai, August 3-5, 242-245, 2009

                31. Rui Jiang*, Wanwan Tang, Xuebing Wu, Wenhui Fu, A random forest approach to the detection of epistatic interactions in case-control studies, Proceedings of the Seventh Asia Pacific Bioinformatics Conference (APBC 2009), Beijing, China, January 13-16, 2009

                32. Xuebing Wu, Qifang Liu, Rui Jiang*, Identification of disease genes via network alignment of human interactome and phenome, Proceedings of the Seventh Asia Pacific Bioinformatics Conference (APBC 2009), Beijing, China, January 13-16, 890, 2009

                33. Feng Zang, Xuebing Wu, Xuegong Zhang, Rui Jiang*, A functional canonical correlation analysis approach to re-verse engineering of in silico gene regulatory networks, Proceedings of the Seventh Asia Pacific Bioinformatics Conference (APBC 2009), Beijing, China, January 13-16, 894, 2009

                34. Wenhui Wang, Wangshu Zhang, Rui Jiang*, Yihui Luan, An approach to the discovery of associations of protein domains and complex diseases, Proceedings of the Seventh Asia Pacific Bioinformatics Conference (APBC 2009), Beijing, China, January 13-16, 908, 2009

                35. Xuebing Wu, Feng Zeng, Rui Jiang*, Integrative inference of gene networks from expression data, Proceedings of the 2008 Joint RECOMB Satellite Conference on Regulatory Genomics-Systems biology-DREAM3, Boston, Massachusetts, USA, Oct 29-Nov3, 2008

                36. Jianxing Feng, Rui Jiang, Tao Jiang, A max-flow based approach to the identification of protein complexes, Proceedings of the 7th Annual International Conference on Computational Systems Bioinformatics (CSB2008), Stanford, California, USA, August 26-29, 2008

                37. Rui Jiang* and Xuegong Zhang, A comparative study of statistical learning methods in the prioritization of nonsynonymous single nucleotide polymorphisms, Proceedings of the Sixth Asia Pacific Bioinformatics Conference (APBC 2008), Kyoto, Japan, January 14-17, 2008

                38. Rui Jiang, and K. Y. Szeto. Extraction of investment strategies based on moving averages: A genetic algorithm approach. Proceedings of the International Conference on Computational Intelligence for Financial Engineering (CIFER'03), Hong Kong, 2003

                39. Rui Jiang, and K. Y. Szeto. Discovering investment strategies in portfolio management: A genetic algorithm approach. Proceedings of the 9th International Conference on Neural Information Processing (ICONIP'02), Singapore, Vol. 3, 2002

                40. Rui Jiang, K. Y. Szeto, Yupin Luo, and Dongcheng Hu. A genetic algorithm architecture by coordinating exploration and exploitation. Proceedings of the Genetic and Evolutionary Computation Conference (GECCO-2001), San Francisco, 383~390, 2001

                41. Dongcheng Hu, Rui Jiang, Yupin Luo, and K. Y. Szeto. An approach to cooperative genetic algorithms. Proceedings of the Sixth International Symposium on Artificial Life and Robotics (AROB 6'01), Tokyo, Japan, Vol.2, 329~332, 2001

                42. Rui Jiang, K. Y. Szeto, Yupin Luo, and Dongcheng Hu. A path-splitting algorithm for large traveling salesman problems with distributed simulated annealing implementation. Proceedings of the Third Asian Control Conference. Shanghai, China. CDROM, 2000

                43. Dongcheng Hu, Rui Jiang, Yupin Luo. Effects of population topology in distributed parallel genetic algorithms. Proceedings of the Fifth International Symposium on Artificial Life and Robotics (AROB 5'00), Oita, Japan. Vol.1, 108~111, 2000

                 

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